Sov is predicted to be composed of 2499 amino acids; however, information about Sov is very limited. In the present report, we characterize the Sov protein and explore the role of Sov in gingipain secretion

by immunochemical and deletion studies. Strains and plasmids are listed in Table 1. Escherichia coli ER2566 (New England Biolabs) was grown in Luria–Bertani broth. Porphyromonas gingivalis was cultured anaerobically (10% CO2, 10% H2, and 80% N2) at 37 °C in BHIHM [brain heart infusion (Becton Dickinson) supplemented with hemin (7.67 μM) and menadione (2.91 μM)]. Before P. gingivalis cell cultures were used in experiments, the turbidity was adjusted to an OD600 nm of 2.0 using a SmartSpec Plus spectrophotometer (Bio-Rad). Ampicillin (100 μg mL−1) and erythromycin (5 μg mL−1) were added to the medium when needed. PCR was performed with Vent DNA polymerase Buparlisib in vitro (New England Biolabs). this website A 0.5-kbp 5′-terminal region of sov was amplified by PCR with primers 5′-CCGGTACCCATATGTCCGTACCTGCCCGGACTGCC-3′ (italics: NdeI site) and 5′-ACGATATTGCGAGTCTGTGTATTGTCG-3′ and then digested with NdeI and NcoI (in the sov). A 0.3-kbp 3′-terminal region of sov was amplified with primers 5′-GAGCAGCACATCACGAATCCGGAG-3′ and 5′-AATCTAGACCCGGGCAGCTGCGTCAGATTGAAACG-3′ (italics: SmaI site) and then digested with NcoI (in the sov) and SmaI. These PCR fragments were

cloned into the NdeI–PstI sites of pTYB2 with an annealed-oligonucleotide linker (5′-CATCACCATCACCATCACTAGTCTAGAGTCGACCTGCA-3′/5′-GGTCGACTCTAGACTAGTGATGGTGATGGTGATG-3′) to create pKS32. To construct pKS33, a 1.3-kbp sov fragment was amplified with 5′-AAGGTACCATGGGGGCTAAGAGCAATGCAA-3′

(italics: NcoI site) and 5′-AATCTAGACAATACAGGATCGCCAAACGCA-3′ (italics: XbaI site), digested with NcoI and XbaI, and ligated to the NcoI–NheI sites of pTYXB-His (Ishiguro et al., 2009). Similarly, a 1.3-kbp sov fragment was amplified with 5′-AAGGTACCATGGCGAAAAAGTACTGCTTCC-3′ (italics: NcoI site) and 5′-AATCTAGACTGTTTCGGTCGTGCTCCGGCA-3′ (italics: XbaI site), digested with NcoI and XbaI, and ligated to the NcoI–NheI sites of pTYXB-His Immune system to create pKS34. Likewise, the kgp gene was amplified with 5′-CTTCACCATGGATGTTTATACAGATCATGGCGAC-3′ (italics: NcoI site) and 5′-TCTCTAGAACGTACATCGTTTGCAGGTTCGATCGT-3′ (italics: XbaI site), digested with NcoI and XbaI, and ligated to the NcoI–NheI sites of pTYXB-His to construct pKS35. ER2566(pKS32), ER2566(pKS33), ER2566(pKS34), and ER2566(pKS35) were grown in Luria–Bertani broth supplemented with isopropyl-β-d-thiogalactopyranoside (0.3–0.5 mM). Cells were harvested, washed, suspended in 30 mM Tris-HCl (pH 8.0) supplemented with Triton X-100 (2%), sonicated (Ultrasonic generator US-150 with tip #7; Nihonseiki, Japan), and ultracentrifuged (110 000 g for 30 min at 4 °C) to remove the supernatant.